Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858724.1_cds_XP_016514053.1_26541
CDS Infomation

[gene=LOC107830890] [db_xref=GeneID:107830890] [protein=transcription factor BIM1-like isoform X3] [protein_id=XP_016514053.1] [location=complement(join(2937..3038,3159..3288,3915..4360,4894..4986,5065..5134,5414..5522,5609..5736,5829..5937,6327..6698,9091..9159,9244..9280))] [gbkey=CDS]
Sequence

ATGGAGCTGCCTCAGCCCAGACCGTTTGGAACAGAAGGGAGGAAGACGACACATGACTTT
CTTTCACTGTATTCACCTGTTCAACAAGATCCAACACCTCCGCAAGCAGGTGGATTCCTA
AAAACGCATGACTTCTTGCAACCACTGGAGCAAGCAGAGAAGGCATTAAGGAAGGAAGAA
GCCAAAGTTGAGGTTGTGGCTGTAGAGAAGCCTCCAGCACCAGTAGCTTCTCCTTCAGTG
GAGCATATTCTTCCTGGTGGCATAGGCACCTATAGCATTTCTTATTTGCACCAAAGGATA
CCAAAGCCAGAAGCAAGCTTGTTTGCTGTAGCACAGGCAACTAGTACCGACAGAAATGAT
GAAAACTCAAACTGCAGTTCTTACACAGGAGGGAGTGGTTTCACACTGTGGGATGAATCT
GCAGTTAAGGGAAAGACAGGGAAGGAGAATTCTGGGGGTGATAGACATGCCCTAAGAGGT
CTGAACACTGGAGGTGGTCAACCTACGACATCATTAGAATGGCAATCACAATCGTCGTCA
AATCATAAACACAACACTACGGCCATAAGTTCGCTCTCATCCGCTCGACAATCATCGCCT
CTTAAGACCCAGAGTTTTGTACACATGATAACATCAGCTAAGAATGCACAAGATGACGAT
GACGACGATGATGAAGATTTTGTGATTAAGAAAGAACCACAGTCGCACCCCAGAGGTAAT
TTGTCTGTAAAAGTTGATGGAGAAGGCAATGATAAAAAGCCAAACACCCCACGTTCAAAG
CATTCGGCAACAGAGCAACGGAGAAGAAGCAAGATCAATGACAGATTTCAGATGTTGAGA
GGGATCATCCCTAACAGTGATCAGAAAAGAGATAAAGCATCATTCTTGCTGGAGGTTATT
GAATATATTCATTTCCTACAAGAGAAAGTGCACAAGTATGAGGAATCATACCAAGGCTGG
GAGAACGAACCTTTGAAGTTACCATTGAGCAAGTGCCATAGGACGACTCAAGGTGCAAGC
AATCATCCTCAAGGCACTATCAATGCATCAGGTGCTGCCCCGACGTATGCAGTAAAGTTC
GATGAGAACATAATGGGGATTTCTTCTACTAATCCTTTTAATGCGCAAAAAGTGGAACCG
AACATAAGCACCACAAGCTTAAAAGAAAGCAGCCAGCGGCCTGGTTTAACAAATAAGGCG
ACAACACCTTCTATGAGCCCAAACACATTTCCATTTTGTGGGGCTAGCACAGCAGCTCTA
TATTCATCTAAGCTGACAGCTGATACTGCTAAGTTGGAGTCAAAGTCTCATCCTCAATTT
TCGGTTAGCAGATCACATATGACTGACTATGCTATTCCAAATGCTAATTCTAAAGGCCAG
GATCTGTCTATAGAAAGTGGTACCATCAGCATTTCTAGTGCCTATTCTCAAGGGTTGTTG
AACACCTTGACACTAGCGCTGCAGAATTCTGGAGTAGATTTGTCGCAAGCCAATATCTCT
GTGCAAATTGATCTTGGGAAGAGAGCAAATGGTAGACTACATTCTTCAGCTTCCACTGTT
AAGGGTGACGATGTTTCCACAAGCAATCAACCAATTCCAAAATCCATAAGTACAAGCACA
AGGGAGGAGTCTGACCGTGCCTTCAAAAGGCTGAAAACTAGTTAA

Peptide Sequence

PEP ID

XP_016514053.1
PEP Infomation

PREDICTED: transcription factor BIM1-like isoform X3 [Nicotiana tabacum]
Sequence

MELPQPRPFGTEGRKTTHDFLSLYSPVQQDPTPPQAGGFLKTHDFLQPLEQAEKALRKEE
AKVEVVAVEKPPAPVASPSVEHILPGGIGTYSISYLHQRIPKPEASLFAVAQATSTDRND
ENSNCSSYTGGSGFTLWDESAVKGKTGKENSGGDRHALRGLNTGGGQPTTSLEWQSQSSS
NHKHNTTAISSLSSARQSSPLKTQSFVHMITSAKNAQDDDDDDDEDFVIKKEPQSHPRGN
LSVKVDGEGNDKKPNTPRSKHSATEQRRRSKINDRFQMLRGIIPNSDQKRDKASFLLEVI
EYIHFLQEKVHKYEESYQGWENEPLKLPLSKCHRTTQGASNHPQGTINASGAAPTYAVKF
DENIMGISSTNPFNAQKVEPNISTTSLKESSQRPGLTNKATTPSMSPNTFPFCGASTAAL
YSSKLTADTAKLESKSHPQFSVSRSHMTDYAIPNANSKGQDLSIESGTISISSAYSQGLL
NTLTLALQNSGVDLSQANISVQIDLGKRANGRLHSSASTVKGDDVSTSNQPIPKSISTST
REESDRAFKRLKTS

Transcript Sequence

Gene sequence data has not been registered.